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Selected Topics in Bioinformatics |
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| Lecturer: |
Prof. Daniel Huson,
Christian Rausch and Tobias Klöpper |
| Time: |
Tu, 9:00 -
10:00 h |
| Location: |
A302 |
Office hours:
|
Daniel Huson:
Thursdays 17-18h, and by appointment, C310a, Christian Rausch:
Tuesdays 10-12h, Tobias Klöpper: Wednesdays
9-11h. |
| Requirements for
admission: |
completed Vordiplom |
Topics:
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Title
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Speaker
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Tutor
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Date
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<Organization>
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19. October 2004
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<Preparation>
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26. October 2004
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| <Preparation> |
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2. November 2004
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| <Preparation> |
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9. November 2004 |
| MUSCLE: multiple sequence
alignment with T-Coffee accuracy and high throughput |
Andreas Schmidt
|
Tobias Kloepper |
16. November 2004 |
| 3DCoffee: Combining Protein
Sequences and Structures within Multiple Sequence Alignments |
Ruijun Shen
|
Christian Rausch |
23. November 2004 |
| Analysis and Prediction of
Functional Sub-types from Protein Sequence Alignments |
Stefan Heess
|
Tobias Kloepper |
30. November 2004 |
| Automatic prediction of protein
function |
Sebastian Halder
|
Christian Rausch |
7. December 2004 |
no seminar (Holger's talk postponed to Jan
18th)
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14. December 2004 |
Jotun Hein, A Heuristic Method to
Reconstruct
the History of Sequences Subject to Recombination, J. Mol. Evolution
36:396-405 (1993)
|
Peter Niermann
|
Daniel Huson |
21. December 2004 |
L. Nakhleh, T. Warnow and C. Randal
Linder,
Reconstructing Reticulate Evolution in Spieces - Theory and Practice,
RECOMB'04:337-346 (2004).
|
Nickias Kienle
|
Tobias Kloepper |
11. January 2005 |
| Jotun Hein,
Reconstructing Evolution of
Sequences Subject to Recombination Using Parsimony, Math. Biosci.,
98:185-200 (1990) |
Holger Plattfaut |
Daniel Huson |
18. January 2005 |
Final Discussion
|
|
|
25. January 2005 |
D. Gusfield, S. Eddhu and
C. Langley,
Optiomal,
Efficient Reconstruction of Phylogenetic Networks with Constrained
Recombination, UC Davis CS Technical Report CSE-2003-29, to appear in:
J. Bioinformatics and Computational Biology.
V. Bafna and V. Bansal, The Number or
Recombination Events in a Sample History: Conflict Graph and Lower
Bounds, to appear in: TCBB.
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Links:
To seach all electronic journals the university of Tübingen has
subscribed to:
Die Elektronische
Zeitschrifenbibliothek
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Teaching