Algorithms in Bioinformatics
Teaching Summer Semester 2008 Seminar Phylogenetic Networks
 
Welcome
People
Research
Publications
Software
Talks
Teaching
  Summer Semester 2008
  Grundlagen der Bioinformatik
  Oberseminar Algorithmen der Bioinformatik
  Seminar Genomics and Metagenomics
  Seminar zum Programmierprojekt
  Seminar Phylogenetic Networks
  Bioinformatics Tools
  Winter Semester 2007/08
  Summer Semester 2007
  Winter Semester 2006/07
  Summer Semester 2006
  Winter Semester 2005/06
  Summer Semester 2005
  Winter Semester 2004/05
  Summer Semester 2004
  Winter Semester 2003/04
  Summer Semester 2003
  Winter Semester 2002/03
  Summer Semester 2002
Bachelor Thesis/ Student Projects
Master Thesis/ Diploma Projects
Studienkommission
Contents
Search
Address
ZBIT
CS Dept.
University
 

Seminar Phylogenetic Networks

 
Lecturers:
Dr. Regula Rupp and Dr. Markus Goeker
Type of course:
Seminar for Bachelor Bioinformatic students. Credits: 4 LP / 2SWS.
Time and location:
Thursday, 10:30 -13:00, F118 (Informatik/Kriminologie)
First session:
Friday, 18 April 2008, 9:00 (s.t.), A104
Office hours/contact:
Dr. Regula Rupp
Obligatory registration by email with matriculation number to:
Dr. Regula Rupp
Maximal number of participants:
10

Outline and scope:
We will read papers on reticulate evolution (involving recombination, horizontal gene transfer, hybridization) and on algorithms for computing networks for data arising through these types of evolution. Literature used for the different presentations are up-to-date scientific reviews and articles which will be provided to the speakers.  Further autonomous literature search is expected.

Each speaker will hold a ~45' talk and present the relevant results to all participants. Presentations can be given in German or in English.
To sign up for this seminar please send an email to Dr. Regula Rupp

Schedule:

Title
Speaker
Date
Tutor
Preliminary discussion

18.4.

TBA

29.5.
Dr. Markus Goeker
TBA
5.6.
Dr. Markus Goeker
Netting, Neighbour-Net
Patricia Molina-Luna, Johannes Junker
19.6.
Dr. Regula Rupp
Median Networks, Pruned Median Networks
Paul Rupek, Gergana Andreeva
26.6.
Dr. Regula Rupp
Reticulogram,QNet Philipp Gaiser, Thomas Bonfert
3.7.
Dr. Regula Rupp
DLT-Networks
Jasmin Kuttner
10.7.
Dr. Regula Rupp


University of Tübingen