Practical Course: "Bioinformatics Software Tools"
| |
| General Subject: |
Practical informatics |
Tutors:
|
Tobias Kloepper, NN und Prof. D.
Huson
|
Time:
|
October 1 2007 - October 12 2007, 9:00-17:00
|
| Amount: |
4 SWS, examinable: 2 SWS |
| Location: |
Computer room C311
|
Office hours:
|
by appointment
|
Enrolement:
|
kloepper@informatik.uni-tuebingen.de
with indication of complete name and matricle number
Maximum number of participants: 9 |
| Description: |
In this tutorial we want to look at several
software tools that are
widely used at the moment.
E.g.: Programs for sequence comparison (pairwise and multiple
alignments,
e.g. ClustalW, T-Coffee, muscle), programs for phylogenetic reconstruction
(e.g.
Phylip, IQPNNI, SplitsTree), database search (e.g. BLAST, HMMer), comparative
sequence assembly (OSLay), Gene finding (e.g. genscan) and others. |
Requirements for admission:
|
| completed Vordiplom Bioinformatik, the lectures
"Algorithms in Bioinformatics
I and II" are recommended. |
|
Course language
The teaching language is German or English if any participant does not
understand German.
For written documents (hand-outs, protocols etc.)
English is recommended.
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