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Algorithms in Bioinformatics II
Course: Algorithms in Bioinformatics II
| Lecturer | Prof.
Dr. Daniel Huson |
| Office hours | Mondays, 16-18h, Office C310a, Sand 14 |
| Times | Mo 10:15-12:00, Mi 11:15-13:00 |
| Credits | 4 SWS lectures+2 SWS Übungen |
| Start | 28. April 2003 |
| Where | Mo: Lecture theater 2, Sand 6/7, Wed:
A301, Sand 13/14 |
| Turnus | yearly in SS |
| Area | Practical CS |
| Problem Session Group 1 |
Tue, 16.15-18h, Large Seminar Room, Sand 6 |
| Problem
Session Group 2 |
Wed,
8.00-10h, Small Seminar Room, Sand 6 |
| Problem
Session Group 3 |
Wed, 16.15-18h, Large Seminar Room, Sand 6 |
| Problem Session Group 4 |
Tue, 16.15-18h, Lecture Hall A301, Sand 1/13 |
Contents:
13. HMMs
14. Gene prediction
15. Suffix trees
16. Suffix arrays
17. Genome Assembly
18. Sequencing from compomers *
19. DNA arrays
20. Peptide sequencing (script by Knut Reinert) *
Download the script here.
*) Dieses Kapitel ist nicht prüfungsrelevant.
Assignments:
Authorship:
These lectures, script, Java files and assignments were developed at the ZBIT by Daniel Huson. Parts of this material is used in a modified form in bioinformatics courses at the FU Berlin and at Uppsala University.
