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Algorithms in Bioinformatics II
Course: Algorithms in Bioinformatics II
| Lecturer | Prof. Dr. Daniel Huson |
| Office hours | Mondays, 16-18h, Office C310a, Sand 14 |
| Times | Mo 10:20-12:00, Mi 11:15-13:00 |
| Credits | 4 SWS lectures+2 SWS Übungen |
| Start | 28. April 2003 |
| Where | Sand 1, Room A301 |
| Turnus | yearly in SS |
| Area | Practical informatics and bioinformatics |
Overview and script:
Algorithmic core problems in bioinformatics, including:
9. HMMs
10. Gene prediction
11. DNA arrays
12. Physical mapping
13. Suffix trees, WOTD algorithm
14. Suffix trees, applications
15. Suffix trees, Ukkonnen's algorithm
16. Sequence assembly
17. Eulerian-path assembly
18. DNA compression
19. Blast, Fast and Blat
Download the script here.
Assignments:
