Lecturer	Prof. Dr. Daniel Huson
Office hours	Mondays, 16-18h, Office C310a, Sand 14
Times	Mo 10:20-12:00, Mi 11:15-13:00
Credits	4 SWS lectures+2 SWS Übungen
Start	28. April 2003
Where	Sand 1, Room A301
Turnus	yearly in SS
Area	Practical informatics and bioinformatics

Overview and script:

Algorithmic core problems in bioinformatics, including:

9. HMMs
10. Gene prediction
11. DNA arrays
12. Physical mapping
13. Suffix trees, WOTD algorithm
14. Suffix trees, applications
15. Suffix trees, Ukkonnen's algorithm
16. Sequence assembly
17. Eulerian-path assembly
18. DNA compression
19. Blast, Fast and Blat

Download the script here.

Assignments:

Assignment1     Java
Assignment2     Java
Assignment3
Assignment4     Java
Assignment5
Assignment6
Assignment7   Java
Assignment8 Java
Assignment9
Assignment10
Assignment11
Assignment12