| Thema |
Name |
2002-3
|
| Application of scaffolding program to
bacterial genomes. (In conjunction with Stephan Schuster at MPI) |
Daniel Richter |
| Algorithms for median
networks |
Markus Franz |
| Implementation of an
algorithm for determining
the planarity of a phylogenetic network (split graph). |
Michael Schroeder |
| Comparison of the human
and mouse genomes. |
Kristina Hug |
| Comparison
of bacterial genomes. |
Alexander Auch |
iPET- Protein alignment
exploration tool
(In conjuction with Andrei Lupas MPI)
Algorithms, Software
design and User Manual
|
Ilka Hoof
Christian Klug
Georg Zeller |
| Classification
of protein subdomains using HMMs (in conjuction with Prof. Wohlleben's
group) |
Esther Rheinbay |
| 2004 |
| Visualization
of multiple genome comparisons |
Anne Arens |
| Intergration of ParSeq
hits in annotated genomes (in conjuction
with Prof. Goetz's group) |
Christiane Nerz |
| XML and Undo/Redo
functionality for CGViz |
Stephan Ossowski |
| Classification of DNA
methyltransferases with Hidden Markov Models |
Alexander Thielen |
| Detection of miRNAs in
plant genomes |
Jó Bitsch
|
| A parser for phylogenetic
file formats |
|
| Visualization of
phylogenetic clustering techniques (in conjunction with Prof. Lupas) |
|
Klinische
Expertensysteme: Status Quo und eine spezielle Anwendung im Bereich der
Antibiotikatherapie
|
Sascha Wagner
|
Implementation of
standard phylogenetic tree drawing algorithms
|
Markus Franz
|
Documentation
and test sets for comparative genomic viewer
|
|
Visualization of
relationships between microRNAs and their targets
|
Isabell Schwab
|
Webification of java
applications
|
Yang Cheng
|
A Z-closure phylogeny
of cyanobacteria
|
Ruijun Shen
|
Prediction
of substrate recognition by nonribosomal peptide synthetase
(NRPS) multi-enzymes and implementation of a predictive
webservice
|
Andreas
Biegert
|
| 2005 |
| Finding RNA
secondary structure motifs in streptomycetes (in conjuction with
Prof. Wohlleben's group) |
Markus Zimmermann
|
| Analysis of Antibiotic
Resistance (in conjuction with Prof.
Wohlleben's
group) |
Christian
Rödelsperger
|
| Comparative miRNA
prediction in
Oryza sativa & Sorghum bicolor |
Christian Mayer
|
| Blazingly fast detection of similar
RNA structures |
Michael Remmert
|
| Identification of
transcription factor binding sites in Arabidopsis thaliana microRNAs |
Philipp Thiel
|
| MicroRNAs und MITEs in Reis
|
Marcel Schumann
|
| Visualization of
non-coding sequence relationships |
Martin Schaefer
|
| 2006 |
Updating known motifs in PKS and NRPS and their
automatic annotation to uncharacterized sequences
|
Vassilena Gaykova
|
| Phylogenetic Analysis of Single
Nucleotide Polymorphisms in Human |
Birgit Bammann
|
Library of graph importers and exporters for
phylogenetic networks
|
|
Library of interfaces to phylogenetic software
|
|
Analysis of metagenome data sets
|
Nikita Meyer
|
| 2007 |
Agent-based simulation of genotype and phynotype
|
Patrick
Kahlert |
Statistical aspects of metagenome analysis
|
Annekatrin
Widmann |
Analysis of metagenome data sets
|
Nikita Meyer |
Mapping of ultra-short reads
|
Roland
Keller |
Bachelor Thesis/ Student Projects