MEGAN download site


Please note that use of MEGAN requires a license key,  obtainable here.

Here is the program:

MEGAN_macos_2beta14.dmg
MEGAN_windows_2beta14.exe
MEGAN_unix_2beta14.sh

If you want to use accession lookup tables (not necessary if blasting against NR or NT), then you will additionally require the following file:

megan-lookup.zip

Here is the latest user manual:

Manual.

Updates of NCBI taxonomy:
To update to the latest NCBI taxonomy, download the following file:
http://www-ab2.informatik.uni-tuebingen.de/megan/taxonomy/ncbi.zip
In the installation directory of MEGAN, unzip this file in the class/resources/files
directory.