Current Diploma and Master theses in bioinformatics in our lab:

Subject	Name	Co-advisor(s)
2008
Implemention of the "Disk-Covering Method" for phylogenetic networks
16 S rRNA trees and MEGAN analysis
Domain adaption in Genome Biology	Christian Widmer	Dr. Gunnar Rätsch (MPI-FML)
Peephole-Optimierung in einem Scheme-48-Compiler mittels Sequenzvergleichsverfahren aus der Bioinformatik	Dirk Hüsken	Prof. H. Klaeren (Informatik)
Evolution von Geschlechtsausprägungen	Annekatrin Widmann	Prof. Nico Michiels (Biologie)
Analysis of ultra-high throughput sequencing data		Prof. Detlef Weigel (MPI-DB)
Time series image processing and data warehousing in plant genetics	Anja Rossipa	Prof. Detlef Weigel (MPI-DB) and Prof. Bernhard Schölkopf (MPI-Cybernetics)
2007
Analysis of dark DNA in metagenomic datasets	Nikita Meyer	Prof. Stephan Schuster (PennState)
Modeling and analysis of hox response elements	Martin Schaefer	Dr. Ingrid Lohmann, Prof. Detlef Weigel (MPI-DB)
Optimal Taxonomy ( PDF )	Patrick Sobetzko	Dr. Markus Göker (Biologie)
Polymorphism detection in rice	Regina Bohnert	Dr. Gunnar Rätsch (MPI-FML)
Development of a metagenome simulator METASIM	Felix Ott	Prof. Stephan Schuster (PennState)
Verhalten kophylogenetischer Tests in Simulation	Marc Lohrer	Dr. Markus Göker (Biologie)

Further Diploma and Master theses in bioinformatics can be found here.