| Subject |
Name |
Co-advisor(s) |
2003
|
| Comparative gene finding |
Nora Pierstorff |
Dr. Stephan
Schuster (MPI)
|
| Whole genome
phylogeny |
Alexander Auch |
Dr. Stefan
Henz and Dr. Stephan
Schuster
|
| 2004 |
| Comparative genome
assembly |
Daniel Richter |
Dr. Stephan Schuster (MPI) |
| Discovering
microRNAs in plant genomes (PDF) |
Christian Klug |
Prof. Detlef Weigel
(MPI) |
Text mining with eTBlast
|
Stephan Ossowski
|
Prof. Harold R.
Garner,
(UTexas Southwestern)
|
Phylogenetic networks-
there are many definitions of phylogenetic networks,
how are they related, which ones are equivalent,
how can they be transformed into each other?
|
Kristina Hug
|
Prof. Pete Lockhart
Massey University
Palmerston North NZ
|
2005
|
A phylogenetic test suite
|
Joerg Behrend
|
Dr. Michael Weiss
Spezielle Botanik und Mykologie |
| Screening und partielle
Charakterisierung von Biosynthese-Genclustern in Amycolatopsis
balhimycina mit bioinformatischen und molekularbiologischen Methoden |
Beatrix Weber
|
Prof. Wohlleben, Dr. Evi
Stegmann
Microbiologie/Biotechnologie |
| Phylogenetic Analysis of
Multidomain Proteins in the Order Actinomycetales |
Ilka Hoof
|
Prof. Wohlleben, Dr.
Tilmann Weber
Microbiology/Biotechnology |
Protein interaction
networks for Arabidopsis
|
Nils Krugmann
|
Dr. Stefan Henz
Prof. Dr. Detlef Weigel
(MPI)
|
Bioinformatics support
for resequencing of Arabidopsis
|
Georg Zeller |
Dr. Stefan Henz, Dr.
Richard Clark
(MPI)
|
Expression footprints of
spliced and non-spliced microRNAs
|
Michael Schroeder
|
Prof. Detlef Weigel (MPI)
|
Biosynthesis KnowledgeBase
|
Marion Renner
|
Prof. Wohlleben, Dr.
Tilmann Weber
Microbiologie/Biotechnologie |
Structural and
conservational analysis of the centromere, kinetochore and two
components of the spindle checkpoint of the budding yeast Saccharomyces
cerevisiae
|
Esther Rheinbay
|
Prof. Peter K. Sorger
Department of Biology, M.I.T. |
The
Protein-Interaction-Network of the SNARE family
|
Nickias Kienle
|
Dr. Dirk Fasshauer (MPI
Göttingen)
|
Integration of
taxonomies in SplitsTree
|
Andreas Schmidt
|
Prof. David Bryant
(Auckland, NZ)
|
2006
|
Working title: Protein
specificity prediction using support vector machines and statistical
methods
|
Marc Röttig
|
Prof. O. Kohlbacher
|
Implementation of a
plugin management system for SplitsTree
|
Sabine Luff
|
Prof Pete Lockhart
(Massey, NZ)
|
Ultraconservation in
Plants
|
Ralf Eilbracht
|
Prof. Detlef Weigel (MPI)
|
Minimal recombination
networks with branch and bound
|
Christian Schmidt
|
Prof. Dominik Begerow
|
Large-scale
co-phylogenetic analysis
|
Jan Meier-Kolthoff
|
Dr. Markus Goeker
|
Sequencing Simulator for
454 reads
|
Ramona Schmid
|
Prof. Mike Steel
University of Canterbury, New Zealand
|
Evaluation
of sequence comparison methods and databases for metagenomics
|
Hedwig
Zimmerer
|
Dr. Markus
Rampp (Rechenzentrum Garching) and Prof. Stephan Schuster (PennState)
|
Implementation of a contig sorting algorithm for OSLay
based on protein data
|
Sandra Haupt
|
Prof. Wohlleben, Dr.
Tilmann Weber
Microbiology/Biotechnology
|
Master Thesis/ Diploma Projects